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Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
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Section-level genome sequencing and comparative genomics of Aspergillus sections Cavernicolus and Usti
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Extracting the Secrets of Secondary Metabolites
… further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not … of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) can then employ CRISPR in … CRAGE allows for the transplanting of these BGCs from one organism into an alternate host via a landing pad …
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A Powerful Technique to Study Microbes, Now Easier
… Lawrence Livermore National Lab biologist Jennifer Pett-Ridge collaborated with … to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots …
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Three Join the JGI User Executive Committee
… earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of Oak Ridge National … Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological Society of … and help develop programs to increase participation from minority-serving institutions in JGI user programs. The …
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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JGI@25: Solving the Mystery of the Missing Oil
… into the Gulf of Mexico, researchers at Lawrence Berkeley National Laboratory (Berkeley Lab) were on the scene … also helped track and characterize the shifting waves of microbial communities involved in removing different … with the JGI successfully simulated how successive waves of microbial populations degraded the dispersed oil.   Terry …
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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut National de la Recherche Agronomique (INRA) in France and … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome …
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JGI Announces 2026 New Investigator Portfolio
… Pictured from left: [Top row]: Emily G. Aguirre, Shauna M. Bennett, … metatranscriptomics and genome assembly to investigate microbial and plant metabolism across diverse ecosystems — … including biological routes for critical minerals recovery, microbial pathways for high-value bioproducts, and …
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Genomics, Exometabolomics, and Metabolic Probing Reveal Conserved Proteolytic Metabolism of Thermoflexus hugenholtzii and Three Candidate Species From China and Japan
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Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
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Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization
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