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Expanding Virophage Diversity
… DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with … DNA genomes that co-infect eukaryotic cells along with giant viruses. Almost all known virophage genomes … approaches. By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees are invaluable pollinators — cupids of the plant … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s vigilant … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… vitamins; zinc fuels some of their most important functions. Even in the chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play an outsize role in cycling carbon and nutrients. … latitudes from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of …
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Learning to Look
… expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of … scarf, striped hat, round-rimmed glasses, or a cane, but only Waldo will have all of these features. As described … use to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
… Biosciences Area Entrepreneurship Program presents… Eyes on the Prize – Launching & Sustaining Startups in Synthetic … 29th, 3:00 pm – 5:30 pm 3:00 pm – 4:15 pm: Panel discussion, Q&A followed by: 4:15 pm – 5:30 pm: Hosted Hoppy Hour @ … Creek Featuring a casual, candid, C-level panel discussion with local industry leaders: Arvind Gupta , Managing …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an esteemed interdisciplinary delegation from the University of Duisburg-Essen (UDE), Germany with the aim of intensifying collaborations in the fields of genomics, structural biology, …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over half the total … that were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data … Google Analytics data, the team noticed that a large percentage of Phytozome users who were seeking to download all the … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… “ Berkeley Lab Receives Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence Berkeley National Laboratory (Berkeley Lab), the National Energy Research … assembled for the first time with  MetaHipMer , taking advantage of scalable parallel algorithms and GPU acceleration, …
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Styling for Safety: PPE, It’s the JGI Way
… PPE or Personal Protective Equipment is worn to minimize exposure to … can cause workplace injuries and illnesses.  PPE or Personal Protective Equipment is worn to minimize exposure to … illnesses. These injuries and illnesses may result from contact with chemical, biological, physical, mechanical, or …
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