Search

In honor of the JGI's 25th anniversary in 2022, we have … impressive environmental and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program. … first legume species with a published complete draft genome sequence. At the time, the vital global source of both …

Proposals aim to sequence and annotate genomes from Antarctica to Africa to … Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … aims to study plant drought resilience in the Sahel, an arid region of West Africa. The staple crop there is millet, …

… with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to … a  Minimum Information for any Stable Isotope Probing Sequence (MISIP) . They differentiate between required … this was the first workshop of its kind on SIP metagenomics,” Malmstrom said.  Increasingly, efforts like …

… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of … which microbes in the soil persist after a wildfire — and why they thrive — gives forest managers more avenues to … builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful snapshot of what soils …

A preview of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated … snippets of microbial genomes directly from environmental sequence data, by piecing each genome together from large …

After studying the mechanism of action of antifungal natural products … she deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist position in 2007, she switched gears from metagenomics to single-cell genomics, which is now her …

A deep dive into microbial genomics reveals one bacterial species is … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … ecotypes because, historically, they have used the sequence of a “marker gene,” namely the 16S ribosomal RNA …

…   Visualizing a novel, candidate viral genome found in the deep … by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria …

Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … C4 pathway, which particularly helps plants thrive in warm, arid environments. Corn and sugarcane are among the major … National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a …

… complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even lighter threads in the mix. But in the Petri dish, the thin vermicelli-like … the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab …