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Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the …
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Viruses Reprogram Cells into Different Virocells
… astronomical figure, and yet viruses outnumber them. In the ocean, viruses outnumber surface microbes 10 to 1, and 20% … For example, microbes that capture and store carbon in the ocean could fix less carbon when infected. Little is known … (EMSL), a DOE Office of Science User Facility located at Pacific Northwest National Laboratory (PNNL). Researchers …
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JGI announces 2024 New Investigator portfolio
… our tools with a widening circle of researchers. That’s why each year we look for novel research projects — aligned … of microbial ecosystems at the forest floor and along ocean shores. Their results could bring key insights into …
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Cataloging the Microbes that Manage the Health of River Systems
… into such bodies of water before heading out to bays and oceans. While river microbes are critical to monitoring and … WHONDRS, a community science river sampling program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …
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NeLLi — Symposium on New Lineages of Life
Overview of Symposium Goals Metagenomic and single-cell sequence data have provided a means to access novel … cataloged and taxonomically classified to date. Under the “sequence to function’ umbrella, this symposium will further … Sea Research (NIOZ) Nicole Poulton , Bigelow Laboratory of Ocean Sciences Roland Hatzenpichler , Montana State …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… functions. Even in the chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play an outsize role in … of the essential trace metal zinc, compared to other oceans. That zinc turns out to be extremely important for … collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom …
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An Automated Tool for Assessing Virus Data Quality
CheckV can help researchers assess virus sequence fragments and data quality. The Science Through … and computational approaches, more and more virus sequences are being recovered and identified from … (IMG/M) suite, as well as sequences from the Global Ocean Virome 2.0 dataset based on open ocean samples. CheckV …
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Partnerships Development Team
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Petra Byl
… infected by giant viruses from subtropical, oligotrophic ocean gyres. She uses genomic and transcriptomic sequencing …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, …
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Natural Prodcast Episode 14: Nigel Mouncey
… to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We …
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