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Secondary Metabolites Program
… computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, … The SMC provides complete sequence and annotation data for secondary metabolite … and the public, and provide programmatic access to all sequence and annotation data and their comments. …
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A novel regulator of the fungal phosphate starvation response revealed by transcriptional profiling and DNA affinity purification sequencing.
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JGI Scientists Pen Genome Watch Articles
… Institute in the UK — a nonprofit that was founded to help sequence the human genome. Today, the Sanger Institute … hot topics in genomics.” And it makes sense to Woyke why JGI would have this role. “We work with leaders in … researcher Sara Calhoun, data scientist Stephen Mondo, and  Fungal and Algal program lead Igor Grigoriev took readers on …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … in various shades of white. To researchers searching for sequences of RNA viruses in large data sets, their work may … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …
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A genomic perspective on fungal diversity and evolution
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FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.
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Comparative Genomics of the Pine Pathogens and Beetle Symbionts in the Genus Grosmannia
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Fungal‐specific transcription factor AbPf2 activates pathogenicity in Alternaria brassicicola
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A High-Quality Genome Resource for the Oak Wilt Pathogen Bretziella fagacearum
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Draft genome of the switchgrass head smut pathogen Tilletia maclaganii
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Environmental Genomics Group
… Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of … Profile HMM search across all IMG metagenomes, capturing sequence diversity for proteins of interest. … better understanding of complex ecosystems within hard to sequence and assemble samples, such as those from soil and …
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Improving the Cacao Genome and Phytozome
… plant is under threat due to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years … through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  HudsonAlpha …
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