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Linking secondary metabolites to gene clusters through genome sequencing of six diverse Aspergillus species
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… organisms can do. And we need the field’s context to see why it matters.” As his career progressed, Hungate has … — such a phenazines — and while she only showed four out of the millions that exist, they’re now easily … these amazing technologies that the JGI has to identify and sequence who’s making what, that the context at a microscale …
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Tracing the Evolution of Shiitake Mushrooms
… mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the family tree for Lentinula. … from the Americas to trace the evolution of Lentinula species.The Lentinula genus diverged roughly 28 million … Asia. Afterward, Lentinula groups evolved further, to four major groups: a lineage in Australasia and L …
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Diversity of Sordariales Fungi: Identification of Seven New Species of Naviculisporaceae Through Morphological Analyses and Genome Sequencing
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Accelerating Metagenomics Discoveries with Deep Learning
… of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural similarities in proteins that low sequence identity may belie. The technology he’s using is … Deep learning algorithms can vectorize faces… … so, why not proteins?         …
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Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (HT), and emendation of the species Turneriella parva
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Complete Genome Sequence of Nitrobacter hamburgensis X14 and Comparative Genomic Analysis of Species within the Genus Nitrobacter▿ †
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… crop varieties grow best in certain regions. Most plant species have adapted to their local environments; for … (Berkeley Lab), has produced a high-quality reference sequence of the complex switchgrass  genome using samples … many parts of the country also helped the team understand why some switchgrass plants from the Northeast have traits …
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Improving the Cacao Genome and Phytozome
… to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years … through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  HudsonAlpha …
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DNA Synthesis Program
… Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of … Science Group supports researchers exploring how to convert sequence into functional assessments. The team has a … of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …
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Plant Microbial Interactions Group
… multipartite phenomenon in additional plant and bacterial species of bioenergy importance. …
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Complete Genome sequence of Burkholderia phymatum STM815T, a broad host range and efficient nitrogen-fixing symbiont of Mimosa species
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