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… than 5,000 data sets of RNA sequences (metatranscriptomes) generated from diverse environmental samples around the … datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then looked into … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …

… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … how these hosts and hitchhikers coexist is key for understanding their impact on wider ecosystems, but … Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint …

… model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … the CSP, researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different … Department of Energy under Contract No. DE-AC02-05CH11231. For the sphagnome project, germplasm establishment and …

… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … A public repository of 52,515 microbial draft genomes generated from environmental samples around the world, … he’s interested in expanding the diversity of the reference database he’s developing called the  Microbial …

… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … the effort to sequence 1000 fungal genomes to create two reference genomes for all fungi families — essentially, the … plant genomics community. The project’s aim is to generate high-quality genome assemblies and annotations for …

… diversity. The article adds to the compendium generated as part of Genomic Encyclopedia of Bacteria and … Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for … collapsed, while these issues are not commonly seen with reference isolates. “For secondary metabolite discovery in …

… For the first time in several years, the DOE Joint Genome … and Exploring Novel BGC Detection Techniques on Fungal Genomes Video Transcript: Emerald Nash : What I’m working on … part about interning here is that I get to meet a lot of researchers that have been working on genomics data for a …

… conference venue This inaugural event will bring together researchers across major ecosystems and disciplines who are developing and applying … of standardized fabricated ecosystems (EcoFABs) designed for precise manipulation and reproducible experimentation of …

… Leveraging decades of technological development, dozens of reference genomes and thousands of resequenced sorghum varieties, a … sequence for a line of sorghum, reference genomes have generated insight into drought tolerance, biomass production … address some of the most pressing challenges of our time. For more information, please visit  …

… JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through … technology, engineering, and mathematics (STEM) workforce. In doing so, it is our ambition to further develop a more diverse and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …

… the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or … He was also senior author on a study which identified new genomes highlighting the diversity of white rot fungi in the … that identified flagella in the terrestrial ancestors of marine-dwelling Chloroflexota, as well as a Nature …