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… have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … mycorrhizal symbionts shuttle water and nutrients to trees; plant pathogens colonize living plants to feed on them.  …

… among lots of other things, he works on the Tiny Earth project, which you’ll hear him describe. [ Go here to learn … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You … collaborate, let us know! Find out more at jgi.doe.gov/user-programs . Thanks, and see you next time!  … Episode …

A., Hadjithomas M., Varghese N. J., Paez-Espino D., Hungate project, collaborators Perry R., Henderson G., Creevey C. …

Lead position in 2009 and assumed the Deputy Director of User Program position in 2021. In addition to her JGI … Science Program Head as well as our Deputy of User Programs. Click to learn more about the program's areas of … top 1%, by Clarivate Analytics 2020 van Niel International Prize for Studies in Bacterial Systematics 2020 …

What if we understood plants and how they adapt to their ever-changing … But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …

… of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while … to study both sides of this interaction up close, using RNA sequencing to understand gene expression: one of the … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… run away, they’ve evolved these really tough cell wall materials that keep microbes — and the enzymes that would be produced by microorganisms — out,” said JGI user/collaborator Michelle O’Malley, a chemical and … into biochemical production.    Over time, as these projects have delivered results, they have also snowballed …

… partnership had become a “model” of sorts at the Lab. “This project represents part of our long term efforts to … support so that they can deliver these programs to our students.”   Following this, several … After working on his post-doctoral position with the Plant and Microbe Interaction group at Oak Ridge National …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel provided a broader perspective:  … Phytozome and will be available for future single-cell projects.” The Berkeley Lab  Biosciences Area has been …

… 5, 16, and 19. Following the completion of the human genome project in 2003, he developed sequencing, assembly, and … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community … plant Setaria. Nature Biotechnology 30: 555-561. The International Brachypodium Initiative. Genome sequencing and …

… energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of Energy … completing the human genome, the JGI became a national user facility. The staff and resources shifted to offering …

… to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing technologies … best for applications. The team works hand in hand with the Project Management Office to help ensure the JGI’s genomic …