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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… Congratulations to Tanja Woyke, who has been awarded the van … recognized Woyke as a pioneer in uncovering the hidden diversity of “microbial dark matter”–that uncultured and unknown majority …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct … related 16S rRNA genes, but these genes mask the striking diversity of their genomic capabilities. According to Boeuf, … Processes and Ecology and the Daniel K. Inouye Center for Microbial Oceanography: Research and Education. …
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Expanding Virophage Diversity
… DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with … available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which … the team concluded, “we provide a global analysis of the diversity, distribution, and evolution of virophages.” Lead …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called … On this bonus episode of Natural Prodcast, it’s the Self …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have … because they often need unique conditions and a specific microbial host to replicate. Sequencing genetic material … aspect of viruses in the environment — their sheer genetic diversity. As pioneers of this field, the JGI has leveraged …
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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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Learning to Look
… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of … a computer could use to conduct a similar type of search in microbial and metagenomic databases. In this case, the …
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Evolution of a Fungal Gene Expression Regulator
… analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a … the largest analysis of 5mC distribution across the fungal tree of life to date, involving more than 500 species of … User Facility, and others like it, are uncovering the true diversity of the fungal kingdom. The abundance of fungal …
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Webinar: PhycoCosm Tutorial
… about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … tools. Questions and Answers 1.  Q(uestion): Why would your Tree ever differ from NCBI Taxonomy? A(nswer): If you find … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Genomic adaptations of the green alga Dunaliella salina to life under high salinity
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Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma
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Testing for the Genomic Footprint of Conflict Between Life Stages in an Angiosperm and Moss Species
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