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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… Mouncey. Using CRAGE, JGI has established a portfolio of microbial hosts that users can select to be engineered. … of stable, synthetic microbial communities to take advantage of their joint metabolisms. Because, together, microbes … as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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Microbial species delineation using whole genome sequences
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Improving Microbial Genome Annotations in an Integrated Database Context
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The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes
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Abiotic selection of microbial genome size in the global ocean
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… inviting researchers to apply for access to multiple genomics and molecular characterization capabilities in just … to contact? A:  Contacts are listed on the proposal call page. Feel free to  reach out to any of them with questions. … range from traditional single cell sequencing and mini-metagenomics to more targeted approaches, such as …
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Open Frameworks Training the Next Generation of Scientists
… higher education that develops skills in fungal biology and genomics.  Myco-Ed :  The Mycological Curriculum for … 316 students in fungal biology, bioinformatics, and genomics.  The Impact For decades, the Department of Energy … for students developing skills in fungal biology and genomics. Fungi can be better understood through reference …
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Protocol for single-cell isolation and genome amplification of environmental microbial eukaryotes for genomic analysis
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JGI Scientists Pen Genome Watch Articles
… Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature … with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the JGI, received a message from Andrea … “Given the great expertise in microbial genomics and metagenomics of the microbiology-focused groups at the Joint …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… metabolites for multiple applications. The planet’s microbial diversity is immense, yet much of it remains … knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative has also utilized a very …
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Emiley Eloe-Fadrosh
… joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging … Emiley Eloe-Fadrosh is the Metagenome Science Program Head at the JGI. Click to learn … quantitative analysis strategy for stable isotope probing metagenomics. mSystems . 8(4):e0128022. Kelliher JM, et al. …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… around the world. That said, we recognize that workforce in genomics, including JGI, is not representative of the … Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial Interactions Group who has mentored several of the … and hard work have carried it through the difficult early stages, so I can begin biological analysis of the data sooner …
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