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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with … appointments at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … “The big surprise of the project was to realize that these genome copies that are spread throughout the whole cell are …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes … and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating … group of marine bacteria called “Vis6” that are found in North Sea algal blooms. The workflow starts by tagging …
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A Shrubbier Version of Rubber
… one tree species: Hevea brasiliensis . It’s great at producing latex that becomes rubber, but it’s vulnerable to disease and climate shifts. So researchers are looking into a desert shrub that’s native to North America: guayule.  This episode was made in …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science capabilities to support BER's mission of …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are lots … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Making a Lichen Together
… The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … lichens. Studying the symbiosis by investigating a lichen’s genomes and transcriptomes could help inform efforts at …
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Eelgrass Proves to Be Much Younger Than We Thought
… The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around … crossed the Pacific again, only this time it traveled north to Washington, British Columbia and Alaska.  Upon its … form of another species, so the scientists had to use the genome itself.   Approximately 67 million years ago, the …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Berkeley National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important one that … Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … what happens with the wildfires, right? I mean, you’re in Northern California, and it doesn’t matter where they are. …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have … climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common … the species. Earlier pan-genomes for other plants, like the soybean relative Glycine max ( 2014 ) and the grass …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … marine environment. And it was that year that the Pacific Northwest had experienced the largest bloom ever observed on … from University of California (UC), San Diego and Scripps Institution of Oceanography (SIO). You can find the podcast …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s … the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect … is convened by the JGI Director to provide guidance on the Institute’s strategic, scientific, technical, informatics, …
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