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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, … to facilitate these efforts. Particular areas of emphasis will be the development of tools and …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers exploring … online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Natural Prodcast Episode 17: Cassandra Quave
… I’m talking about is called the Convention on Biological Diversity . And there’s something called the Nagoya Protocol … have– there were some isolated cases but it wasn’t as widespread as we have today. And the sad truth is MRSA and … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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Endogenous short RNAs generated by Dicer 2 and RNA-dependent RNA polymerase 1 regulate mRNAs in the basal fungus Mucor circinelloides
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Polyphenol rewiring of the microbiome reduces methane emissions
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements … pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the Stable …
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Integrating Experimentation with Data
…   Registration for this meeting has closed           Registration fees:                 … attendees: $500     Students: $200      Postdocs: $250     Industry: $700    Thanks for joining the Joint Genome Institute (JGI) and the Environmental … peer-reviewed proposal process—enabling researchers worldwide to explore complex biological and environmental systems …
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Nitrogen fixation in Pampinifervens, a new species-rich genus of Aquificaceae that inhabits a wide pH range in terrestrial hot springs
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced … as reliable markers for classifying species and studying diversity in complex biological systems. By making the tools and data available through MycoCosm — a platform widely used across the research community — the work lowers …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep … Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … attempts at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural … This is episode 4 of Natural Prodcast, our interview with Dr Nancy Keller from …
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Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains
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