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Fungal Friends or Foes in Plant Roots
… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified … friends or foes. The Impact Microbial communities comprised of fungi and bacteria can thrive in plant roots. They play …
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Halophytes and heavy metals: A multi‐omics approach to understand the role of gene and genome duplication in the abiotic stress tolerance of Cakile maritima
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Plant genotype and rhizobia strain combinations strongly influence the transcriptome under heavy metal stress conditions in Medicago truncatula
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced nearly 10,000 new annotations of fungal mitochondrial genomes — the DNA found inside … all fungi, and found that some of these genes have moved from the mitochondria into the nuclear genome over …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around the world, … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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Metabolomics
… functional genome annotation, improves understanding of the role small molecules play in diverse biological … sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and environmental samples using …
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A viral reckoning: viruses emerge as essential manipulators of global ecosystems
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EcoFABs: advancing microbiome science through standardized fabricated ecosystems
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Environmental Genomics Reveals a Single-Species Ecosystem Deep Within Earth
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Soil microbiome feedbacks during disturbance-driven forest ecosystem conversion
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Soil metabolomics: Deciphering underground metabolic webs in terrestrial ecosystems
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User Executive Committee Charter
… users and their science including technical capabilities offered, proposal review procedures, and the annual user … recommendations to the JGI regarding technical capabilities offered, including areas where more or less capacity is … and each user can vote for as many candidates as there are openings. Meetings The UEC will meet in person once per year …
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