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High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775T, a plant pathogen of French bean pods
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …
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Ian Blaby
Dr. Blaby heads the DNA synthesis platform at the Joint Genome Institute, where he leads three groups focused on HTP … at University of Florida and UCLA he has worked with a wide range of eukaryotic algae, archaea and bacteria with a … Award for Research Excellence … Education … Selected Publications … Awards and Honors …
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Making a Lichen Together
… him super strength. For lichen, the partnership is more commonplace — though perhaps no less dramatic. In lichen, … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … communication and cooperation. Their partnership is widespread and cosmopolitan: more than 20,000 ascomycete …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located …
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JGI@25: Studying Sorghum’s Survival Skills
… climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common … as well. In 2009, the JGI sequenced and analyzed the first reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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User Programs
… accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s … November 2025 March 2026 …   Learn more about our individual calls and other opportunities to work with the JGI … …
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Operating Expenses
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JGI@25: Strengthening Soybean
… solve energy and environmental challenges. Maximizing soybean yield is critical to energy independence in the U.S. … and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has … Institute for Agricultural Research (INRAE) to sequence a reference genome for the fungus Phakopsora pachyrhizi , a …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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From Competition to Cooperation
… lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader analysis than had ever been done before to look at how … lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, including those …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …
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