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… validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging … been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this … more genomes from complex metagenomes than any of the single binning tools alone,” primarily because of its …

… In a special issue of mSystems , out May 14, 2019, JGI researchers are among … article, Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools …

… genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced … inside mitochondria, the energy-producing structures within cells. This is the largest dataset of its kind ever … First, they scanned over 26,000 publicly available metagenomes in the JGI's IMG portal for mitochondrial …

… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how … allow simultaneous measurement of multiple samples in a single experiment — and integrated these data with … gene expression maps. Together, the scale of data enabled by these approaches creates a vast resource offering …

… DNA sequencing data gathered from whole samples rather than single cells or isolated strains, is easy to generate, but … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in … viruses. Isolating and co-cultivating these viruses has enabled findings on host range, morphological structures, … reference genome, to sift for snippets of giant viruses in metagenomes. This has been useful in marine environments, …

… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, … to soil carbon storage during simulated range shifts of plant-fungal symbionts … Elucidation of the gene regulatory networks governing terpenoid-mediated … Characterization of simplified soil communities with high and low carbon use …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … The parallel development of the SODmap Mobile app enabled SOD Blitz participants to geotag specimens they …