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… or 5mC. In many organisms, 5mC is an important piece of how they regulate their genomes, but is not well understood … Fungal Genomes initiative of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … that unlike most flowering plants and animals, fungi lack gene body methylation. The analysis revealed that 5mC in …

Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells … viruses. Almost all known virophage genomes share only four genes in common: major and minor capsid proteins (MCP and … the team concluded, “we provide a global analysis of the diversity, distribution, and evolution of virophages.” Lead …

… fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based … within IMG. While ANI is integrated within IMG, ani.jgi.doe.gov serves the current data. … The mission of the …

… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … and a specific microbial host to replicate. Sequencing genetic material directly from samples sidesteps these challenges, since it doesn’t require this kind of lab culture. Beginning in the …

Information, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … than 5,000 data sets of RNA sequences (metatranscriptomes) generated from diverse environmental samples around the … will be able to estimate the actual size of the RNA virome However, this is now real Big Data, we are dealing with …

… — skills that matter increasingly as the climate warms. However, these are complicated interactions to untangle. … soil RNA to fungal genomes.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … the world. These tools give researchers a way to access much more information about fungi in these environments. …

… to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and … and annotation of all publicly available genomes from three domains of life, in a uniquely integrated context. IMG/M … host taxonomy, conjugation potential, antibiotic resistance genes, and ecosystem information. … The IMG/VR database …

… up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be … is part of the mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … (Berkeley Lab). Transcription factors control when and how genes are turned on or off, so transcriptional …