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Secondary Metabolites Program
… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and communication. … secondary metabolites, expanding their potential applications in the bioeconomy including biofuels, biochemicals … to the broader goal of enhancing biotechnological applications, from biofuel production to improving the resilience …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of fungi … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … different organizations is discoverable and accessible. Linking the resources of powerful institutions like the JGI, … (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … the drug wants to do. ALISON: Okay, so it’s for drug applications. Is it any particular kinds of drugs? Like … to translate our fundamental findings into specific applications for our human benefits. DAN: Now, you and I are …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team … Neurospora crassa, and to identify and decide on the order in which this fungus breaks down plant cell wall materials … We acknowledge the use of deletion strains generated by Grant P01 GM-068087 “Functional Analysis of …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 years ago, the  Genomes OnLine Database … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … Filling in the Plant Tree of Life … Genome Insider …
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Natural Prodcast Episode 15: Katherine Duncan
… Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you … pretty cool as well. A lot of them have looked at applications like biofuels. Dan Udwary: Sure. Kate Duncan: But … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 Annual Meeting . The … Keynote Talk Title: CRISPRology — The Science and Applications of  Genome Editing (Virtual) Jennifer Doudna is a … in their samples, Doudna and her team investigated the enzymatic mechanisms behind CRISPR. “We soon realized that …
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DNA Synthesis Program
… Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights into how these ocean … most determined scientist.  Recent work in  Nature Communications takes on the challenge of understanding one of these … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … categories of proteins, including those with pivotal applications in biotechnology, such as DNA editing enzymes.” … it is very hard to have 100 sequences from different locations or habitats that align very well, randomly,” …
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