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Identifying genomic data use with the Data Citation Explorer
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Genomic Features of the Bundle-Forming Heliobacterium Heliophilum fasciatum
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Improving the Cacao Genome and Phytozome
… (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global chocolate brands couldn’t … today the plant is under threat due to climate change and devastating fungal infections. That’s why Mars, Inc., a maker … by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the …
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Accelerating Metagenomics Discoveries with Deep Learning
… shared their works-in-progress with 86 participants in an online workshop to harness deep learning for metagenomic … by applying them to sequencing data. At the workshop, Volkan Sevim, a computational biologist at the US Department … using HMM profiles of protein domains from the pfam database to test the efficacy of a particular kind of deep …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for … various bioinformatic tools and comprehensive curated databases, including nomenclatural and genomic information … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Improving Microbial Genome Annotations in an Integrated Database Context
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Corymbia Genome Expands Terpene Synthesis Knowledge
… The Science From the distinct smell of eucalyptus to the flavor of wine, terpenes are ubiquitous. A diverse group of … assembly of two Corymbia citriodora subspecies variegata genomes allowed researchers to study the conservation and … from a biofuels production perspective. By using genomic database alignment tools, researchers searched for TPS genes …
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Obligate biotrophy features unraveled by the genomic analysis of rust fungi
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured … Department of Energy (DOE) colleagues. “At that time (1986) 98% of the human genome was thought to be junk DNA, so … one second. “It isn’t just the generation of vast troves of data, it’s the new areas of scientific possibility that …
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The parallelism motifs of genomic data analysis
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IMG: the integrated microbial genomes database and comparative analysis system
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The genome of Pelobacter carbinolicus reveals surprising metabolic capabilities and physiological features
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