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Mutations in the predicted DNA polymerase subunit POLD3 result in more rapid flowering of Brachypodium distachyon
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Transposition of HOPPLA in siRNA-deficient plants suggests a limited effect of the environment on retrotransposon mobility in Brachypodium distachyon
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Information theory and machine learning illuminate large‐scale metabolomic responses of Brachypodium distachyon to environmental change
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Multilab EcoFAB study shows highly reproducible physiology and depletion of soil metabolites by a model grass
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an … mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant … of a plant in the soil. And I’m specifically working with a grass plant that’s similar to wheat and rice called …
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David Goodstein
… gene models in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative … Dr. Goodstein currently leads the Plant Comparative Analysis group, and is responsible for genome annotation, … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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SECONDARY WALL ASSOCIATED MYB1 is a positive regulator of secondary cell wall thickening in Brachypodium distachyon and is not found in the Brassicaceae
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JGI@25: Studying Sorghum’s Survival Skills
… climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … JGI: 2009: JGI and collaborators use whole-genome shotgun sequencing to analyze the 730-megabase Sorghum bicolor (L.) …
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How Filamentous Fungi Sense Food
… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to … strains generated by Grant P01 GM-068087 “Functional Analysis of a Model Filamentous Fungus” and that are …
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Natural Prodcast Episode 17: Cassandra Quave
… things, because a lot of what we do at JGI in terms of the sequencing that we do is very people-disconnected, and … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …
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Reference genome sequence of the model plant Setaria
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Genome sequence of the model rice variety KitaakeX
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