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Particle‐association lifestyle is a phylogenetically conserved trait in bathypelagic prokaryotes
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A SNP resource for Douglas-fir: de novotranscriptome assembly and SNP detection and validation
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VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses
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Accurate, multi-kb reads resolve complex populations and detect rare microorganisms
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Reference-free structural variant detection in microbiomes via long-read co-assembly graphs.
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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even lighter threads in the mix. But in the Petri dish, the thin vermicelli-like … Université des Antilles, described the morphological and genomic features of this giant filamentous bacterium, along …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum …
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A viability-linked metagenomic analysis of cleanroom environments: eukarya, prokaryotes, and viruses
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Metagenomic insights into the taxonomy, function, and dysbiosis of prokaryotic communities in octocorals
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Prodigal: prokaryotic gene recognition and translation initiation site identification
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Transductomics: sequencing-based detection and analysis of transduced DNA in pure cultures and microbial communities
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