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Uncovering Novel Genomes from Earth’s Microbiomes
… for multiple applications.       Despite advances in sequencing technologies and computational methods in the … genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be cultivated under … and environments, including natural and agricultural soils, human- and animal-host associated, and ocean and …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey … User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “This represents the largest … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… for multiple applications The planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Scaling High‐Resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States
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A global survey of arsenic-related genes in soil microbiomes
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Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8T)
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once … the world, resulting in a five-fold increase of RNA virus diversity. “The world of viruses around us is vast, and we …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who … discussions on how to capture and characterize viral diversity, understand the role of viruses in natural … Virus-Driven Alterations of Microbial Metabolism in Model Soil Ecosystems,” uses a combination of experimental …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … is a chemical compound called geosmin that’s produced by soil bacteria that live all over the place. So that smell of …
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Exometabolite niche partitioning among sympatric soil bacteria
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A genomic perspective on stoichiometric regulation of soil carbon cycling
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Characterization of Trapped Lignin-Degrading Microbes in Tropical Forest Soil
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