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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to … and many of those come from efforts with total synthesis or re-isolation. So that is something that we are … to hear from you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural …
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Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize … scan for those snowflakes, or RNA virus sequences. Using this workflow, the team combed through more than 5,000 … While most organism’s genetic information is encoded in DNA, with RNA delivering the instructions inside DNA to the …
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A synthesis of bacterial and archaeal phenotypic trait data
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural … did my Ph.D. with Craig Townsend and worked on aflatoxin biosynthesis, aflatoxin being a secondary metabolite from an … to begin with. So transformation, or manipulation of the DNA of genes and bacteria, occurred much faster earlier than …
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural … perspectives on evolution of natural products biosynthesis. I think it will be fun to be able to provide a … at the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept breaking our …
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Endogenous short RNAs generated by Dicer 2 and RNA-dependent RNA polymerase 1 regulate mRNAs in the basal fungus Mucor circinelloides
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… new annotations of fungal mitochondrial genomes — the DNA found inside mitochondria, the energy-producing structures within … team then extended their analysis beyond the reference set, using two additional approaches. To search environmental … The work conducted by the U.S. Department of Energy Joint Genome Institute …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a … communities, and other relevant organisms. We provide access to large-scale datasets and analysis tools for … and operated by the University of California for the U.S. Department of Energy.   …
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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs
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