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Rapid selective sweep of pre-existing polymorphisms and slow fixation of new mutations in experimental evolution of Desulfovibrio vulgaris
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …
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Open Frameworks Training the Next Generation of Scientists
… technologies provide opportunities for students and professors alike The Science In  PLoS Pathogens , a team of … higher education that develops skills in fungal biology and genomics.  Myco-Ed :  The Mycological Curriculum for … involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … greater bioeconomy. By bringing together publicly available genomic data on algae into one place, PhycoCosm allows users …
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The Sequences of 1504 Mutants in the Model Rice Variety Kitaake Facilitate Rapid Functional Genomic Studies
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Natural Prodcast Episode 22: Alison Narayan
… Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us genome miners get really jazzed about finding enzymes that …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures … the need for a more comprehensive exploration of genomic DNA modifications (epigenome).  In  Nature Ecology & …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … besides Europe and Antarctica. A  new analysis takes a  genomic look at Lentinula samples from around the world. By … 1456588 to D.H. and DEB-1442113 to A.R., the Department of Energy award 0000238431 to D.H., the GENOBIOREF …
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IMG 4 version of the integrated microbial genomes comparative analysis system
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IMG/M: integrated genome and metagenome comparative data analysis system
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IMG: the integrated microbial genomes database and comparative analysis system
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The integrated microbial genomes system: an expanding comparative analysis resource
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