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Cas9-Based Metabolic Engineering of Issatchenkia orientalis for Enhanced Utilization of Cellulosic Hydrolysates
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Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a … from the Webinar: 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more … how it could possibly be incorporated with some of KBase’s metabolic modeling narratives A:  KBase doesn’t currently …
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Spacer2PAM: A computational framework to guide experimental determination of functional CRISPR-Cas system PAM sequences
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iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria
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Acquisition of host-derived carbon in biomass of ectomycorrhizal fungus pisolithus microcarpus is correlated to fungal carbon demand and plant defences.
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Multiple origins, one evolutionary trajectory: gradual evolution characterizes distinct lineages of allotetraploid Brachypodium.
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome Institute, where he leads three groups focused on HTP DNA design and assembly, strain engineering and bioinformatic tool development/data analysis for … – University of Florida; University of California, Los Angeles …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that aminotransferase enzymes have … back story — they rely on enzymes that have been evolving for billions of years. However, these enzymes are often … and fungi. We thought this kind of analysis would provide a framework for the evolution of this enzyme family,” said …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface … fresh organic carbon which can serve as a food source for other microbes into the environment. Summary In J. R. R. … to eight separate groups of viruses. To visualize one particular viral genome in action, they utilized a …
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Genome-centric view of carbon processing in thawing permafrost
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A synthetic pathway for the fixation of carbon dioxide in vitro
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Integration of Metagenomic and Stable Carbon Isotope Evidence Reveals the Extent and Mechanisms of Carbon Dioxide Fixation in High-Temperature Microbial Communities
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