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Populus MYC2 orchestrates root transcriptional reprogramming of defence pathway to impair Laccaria bicolor ectomycorrhizal development
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Frequently Asked Questions: Project Management
Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … … work done by the JGI. More information is available in our Publications Policy on our Data Policy & Support page.  … …
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Taxonomic and Functional Diversity of a Quercus pyrenaica Willd. Rhizospheric Microbiome in the Mediterranean Mountains
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … Yeah. DAN: Yeah. So that involves figuring out the structure of that pure molecule. And that can that can take … get to say that six of those are based on natural product structures.  DAN: One of the things that keeps me awake at …
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Ancient Algae Reveal Secrets of Plant Evolution
… from water to land. Key gene groups involved in stress tolerance and multicellularity enabled plants to develop complex structures and adapt to changing environments — ultimately … responses are interconnected, suggesting that this genetic network was already in place in ancient algae. Essentially, …
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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against infections — using … zealexins and related precursors into a bonanza of diverse structures. The Impact Zealexins belong to a class of … genes encoding these enzymes to another plant, such as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI …
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Thermal Stress Has Minimal Effects on Bacterial Communities of Thermotolerant Symbiodinium Cultures
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An Integrated Dataset to Understand Ecosystem Interaction
… as well as the soil surrounding their roots (known as the rhizosphere), researchers hope this massive and integrated … data set will help identify how different elements of the ecosystem interact and respond to changes in the … pathways and metabolites associated with the tree’s stress response. Finally, using transcriptomics, researchers …
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … the correlations between the integral biomarkers and abiotic factors for water content, nitrogen concentration, … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks
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Pleiotropic and Epistatic Network-Based Discovery: Integrated Networks for Target Gene Discovery
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HipMCL: a high-performance parallel implementation of the Markov clustering algorithm for large-scale networks
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