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Niche differentiation of bacteria and fungi in carbon and nitrogen cycling of different habitats in a temperate coniferous forest: A metaproteomic approach
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint … in support of the DOE’s research mission.     Director's Perspective     Honors & Awards …
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Operating Expenses
… FY2025 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program within the DOE Office of …
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Natural Prodcast Episode 16: Marcy Balunas
… DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … to do some really exciting work on figuring out how to get genomic sequencing data for the fungus garden because it’s …
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A genomic perspective on fungal diversity and evolution
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National … of 225 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a …
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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy … in China and involving Francis Martin from the Institut National de la Recherche Agronomique (INRA) in France and Igor … JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven … search environmental data, they developed a two-stage metagenomic detection pipeline: First, they scanned over 26,000 …
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Multiple microbial guilds mediate soil methane cycling along a wetland salinity gradient
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Chaparral wildfire shifts the functional potential for soil pyrogenic organic matter and nitrogen cycling
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a … Brachypodium distachyon is a small annual grass that is well suited to experimental manipulation in the laboratory because of its compact genome, diploid nature, self compatibility, …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… As part of the JGI’s 25th anniversary celebration, the 2022 … of these talks below, starting with Ari Patrinos. The Genomics Arms Race Ari Patrinos , Former Director of DOE’s … and a lot of hard work along the way. In this historical perspective of the Human Genome Project , Patrinos walked …
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