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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut Creek to the heart of … 100 were silent. Twenty years after the JGI united the genomics expertise of three national labs in one long … Creek, after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a …
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Taking Stock of the Known and Unknown Microbial Space
… in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite all the genomes we've sequenced, … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the Biological and Environmental Research … for Biotechnology . We are located in the Integrative Genomics Building in the heart of the Berkeley Lab campus, …
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Data Ecosystem
… to integrated data, improve tools and infrastructure as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … to facilitate these efforts. Particular areas of emphasis will be the development of tools and …
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help … could be used for renewable fuel. In fact, lipids can make up more than 90 percent of the microbe’s dry weight. In …
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Learning to Look
… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … Simon Roux, a JGI research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are stealth agents …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and … of the genome sequence also provides insights into how the multiple chromosomes of Miscanthus arose by ancient … Researchers at CABBI and elsewhere are following up on these discoveries to develop new varieties of …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and … of the genome sequence also provides insights into how the multiple chromosomes of  Miscanthus arose by ancient … Researchers at CABBI and elsewhere are following up on these discoveries to develop new varieties of  …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … more than 100 algal genomes, compare them, and visualize supporting experimental data. The Impact Algae are important … sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan …
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An ancestral Matryoshka doll
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new insights … provide a list of machine parts, and an idea of their groupings.  One pivotal effort along these lines came from UC … what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized hundreds of  …
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Zhong Wang
Research in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up genomics analysis to … and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer …
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