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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have … materials, rumen microbes and their enzymes are an optimal study subject that could lead to more sustainable energy … — a then-novel approach which allows scientists to study microorganisms that can’t be cultured by analyzing and …
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How to Target a Microbial Needle within a Community Haystack
… make-up of specific uncultivated microbes from complex environmental samples. The Science A team led by researchers at … allow researchers to focus on specific microbes within metagenome samples and associate their sequences with their … Testing the HCR-FISH+FACS targeted pipeline on North Sea metagenomes as a proof of principle, the team used a …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … we’re highlighting genomic science research that feels especially relevant to living on a changing planet. Mo Kaze … and metabolism, work on which she is expanding with her study of microbes in California’s manmade water transport …
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Getting back to the grass roots: harnessing specialized metabolites for improved crop stress resilience
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Genomic insights into redox-driven microbial processes for carbon decomposition in thawing Arctic soils and permafrost.
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Population ecology and biogeochemical implications of ssDNA and dsDNA viruses along a permafrost thaw gradient
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have … culture. Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. … over 125,000 partial and complete viral genomes. That study multiplied the number of known viral genes by a factor …
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Comparative transcriptomics and metabolomics reveal specialized metabolite drought stress responses in switchgrass (Panicum virgatum)
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Signatures of transposon-mediated genome inflation, host specialization, and photoentrainment in Entomophthora muscae and allied entomophthoralean fungi
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Extreme overall mushroom genome expansion in Mycena s.s. irrespective of plant hosts or substrate specializations.
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Bacterial barcoding facilitates plant microbiome studies.
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Metagenomics
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