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Tanja Woyke
… primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed … Member for Lake Arrowhead Microbial Genomics Conference (2017-current) Genomic Standards Consortium Advisory Board … Editor 2016-2021), Peer J (2015-2019), Scientific Data (2017-2019). Reviewer for major journals and funding …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… plans to analyze and distribute data through the  DOE Systems Knowledgebase (KBase) , a free, open source data … The work builds upon a pilot project to sequence antimicrobial-producing strains. Established by Handelsman, Tiny … to crowdsource antimicrobial discovery for the control of plant pathogens, partnering with 600 instructors worldwide …
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Yasuo Yoshikuni
… the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and … for non-model organisms, modulating microbe-microbe and plant-microbe interactions in various environments to … sugar polymers in macroalgae and developing the first microbial platform technologies unlocking the potential of …
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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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Partnerships: Myco-Ed
… and potential applications. … The Department of Energy Systems Biology Knowledgebase (KBase) is involved in the … scalable computing infrastructure to perform sophisticated systems biology analyses. The platform is a freely available …
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JGI@25: Using Team Science to Build Communities Around Data
… along with 100 of his colleagues in the comparative plant genomics community. The project’s aim is to generate … representing all major evolutionary lineages in the land plant tree of life.   As of the start of 2022, there were … material in hand,” said Jeremy Schmutz, lead of the JGI’s Plant Program, including genomes that are both large and …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
Hardworking Team Todd Anderson , Director of the Biological Systems Science Division at DOE Office of Biological and … Todd Anderson currently works to support understanding of plants, microbes and environmental communities that have … manager in 2006 when the JGI transitioned from human to microbial genetics. Drell held the role until he retired in …
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Ancient Algae Reveal Secrets of Plant Evolution
Research uncovers the genetic foundations that helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , scientists have enhanced our understanding of how early plants transitioned from water to land. Key gene groups …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi deliver … grasses, like sorghum and switchgrass. We’re optimizing systems now, so that we can get those working,” Cole said.  …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi deliver … grasses, like sorghum and switchgrass. We’re optimizing systems now, so that we can get those working,” Cole said.  …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… the shared genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , … thus allowing them to spread across most of the plant’s ecosystems. The Impact For decades, the liverwort  M. … no. 101001675-ORIGINS) and from the FRM/FSER (FRM/FSER202302017064) to P.-M.D., from the CNRS to P.-M.D. and H.P. …
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Emiley Eloe-Fadrosh
… joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research … She stepped into the Metagenome Program Lead position in 2017. She also leads the DOE’s multi-lab National Microbiome … analysis strategy for stable isotope probing metagenomics. mSystems . 8(4):e0128022. Kelliher JM, et al. 2023. …
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