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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence Berkeley National Laboratory … that supports “an unprecedented assembly of environmental microbiomes.” JGI’s Chief Informatics Officer  Kjiersten … to assemble, for the first time these large environmental  microbial data sets for JGI users, which include projects …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… wanted to get out there as soon as possible. Not one of our normal interviews, but instead it’s two interviews in … long, it’s definitely because we like talking about our science. So, sorry, but not really sorry. I haven’t … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called …
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JGI Workshop at 2025 Aquatic Sciences Meeting
… Details forthcoming at ASLO 2025 Aquatic Sciences Meeting …
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Tanja Woyke
… primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed … Scientist appointment at the Bigelow Laboratory for Ocean Sciences since 2012 and an Adjunct Professor at the … specific questions regarding their proposed research are encouraged to schedule time with Tanja Woyke . Click to …
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Exabiome: Advancing Microbial Science through Exascale Computing
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An Integrated Dataset to Understand Ecosystem Interaction
… the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand how ecosystems work and … trees. The data set generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization … was sponsored by the U.S. Department of Energy, Office of Science, Biological and Environmental Research. Oak Ridge …
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Cataloging the Microbes that Manage the Health of River Systems
… on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … be the first publicly available, river-focused microbial resource that provides information at multiple scales from …
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Axel Visel
… the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation … and as an Adjunct Professor at the School of Natural Sciences at the University of California, Merced. Dr. Visel … Deputy for Science Programs. Click to learn more about our seven science program — their areas of focus, major …
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How to Submit Sequencing Samples
… in the process. If you have any questions, please contact your Project Manager or [email protected] . … the importance of proper nucleic acid quantification in our Illumina and PacBio sequencing workflows and provide … (or for metagenomes, sample names).  Need help naming your organisms? See our Taxonomy Quick Guide. PM sends PI the …
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
… The Department of Energy's Computational Science Graduate Fellowship (DOE CSGF) program was developed to meet the Nation's growing need for science and technology professionals with advanced computer … JGI's Sam Deutsch. Learn more about the DOE Computational Science Graduate Fellowship Program at …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… bacteria function and colonize diverse environments. The Science Cyclic di-GMP (Guanine Monophosphate) is found in … functions. It plays an important role in regulating microbial cellulose production and biofilm formation, which affects a number of environments, including plants, soil, and the gut. To better understand the dynamics of this …
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Webinars on Offerings & Capabilities
… process by better understanding the capabilities and resources available for your project. Watch all the webinars here . You can find additional webinars covering how to use our data portals here.  …
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