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Deforestation impacts network co-occurrence patterns of microbial communities in Amazon soils
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Variation in Root Exudate Composition Influences Soil Microbiome Membership and Function
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Impacts of land-use change on soil microbial communities and their function in the Amazon Rainforest
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Propagation of viral genomes by replicating ammonia-oxidising archaea during soil nitrification
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Thermal adaptation of soil microbial growth traits in response to chronic warming
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Metagenomics
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An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship … poplar ( Populus trichocarpa ) trees, as well as the soil surrounding their roots (known as the rhizosphere), … Laboratory (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …
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Programs & Platform Leads
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Natural Prodcast Episode 3: The Primer, Part 3
… a new culture of a new bacteria that you pulled from the soil, maybe it’s, you know, we talked about sponges, go pull …
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JGI Early Career Researchers Featured in mSystems Special Issue
… Communications paper, uncovering giant virus sequences in soil for the first time. A second approach known as DNA … has advanced drastically, aided by genome assembly from metagenomes. This is a critical step toward better …
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Soil bacterial populations are shaped by recombination and gene-specific selection across a grassland meadow
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Metatranscriptomic Sequencing of a Cyanobacterial Soil-Surface Consortium with and without a Diverse Underlying Soil Microbiome
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