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Detection of short-term cropping system-induced changes to soil bacterial communities differs among four molecular characterization methods
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Protist impacts on marine cyanovirocell metabolism
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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut National de la Recherche Agronomique (INRA) in France and Igor … but also because they influence geochemical cycling in forest ecosystems. By deciphering the fruiting-related …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the environment. The Impact Dubbed “the” bioenergy tree, poplars are known for … This research was sponsored by the U.S. Department of Energy, Office of Science, Biological and Environmental …
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A Powerful Technique to Study Microbes, Now Easier
… Lawrence Livermore National Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots have made these …
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main … — are actually capable of naturally modifying lignin.  The Impact Traditional methods for breaking down biomass use … modify lignin without oxygen and make use of it, it would change the entire landscape of biomass production and …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … gotten more interested in microbes with the potential to impact global climate change, he said. “To understand the trajectory of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Impact of Harvest on Switchgrass Leaf Microbial Communities
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Major impacts of widespread structural variation on sorghum.
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DAS Tool for Genome Reconstruction from Metagenomes
… from soil metagenomes compared to other methods. The Impact Understanding how individual microbes interact with … how these microbes respond and adapt to environmental changes. Summary Researchers have been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is … online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … terms of functional diversity as well.”  Researchers from Harvard University, Indiana University. University of Crete …
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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