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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of … investigated Chromosome 16, which contains about 3% of the human genome. They wanted to learn about the genes … years. The DOE brought together the people and resources from these three national labs to form the DOE Joint Genome …
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A Catalog of Reference Genomes from the Human Microbiome
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Finding the Fermenters
… researchers recently compiled a list of with more than 8,300 organisms from multiple sources, including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … National Institute of Food and Agriculture grant 2018-67015-27495, the United States Department of …
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Discovery and annotation of small proteins using genomics, proteomics, and computational approaches
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Disclaimer
… NOTICE Information from this server resides on a computer system funded by the … With respect to documents available from this server, neither the United States Government nor … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… and clouds of insects hover just above. Described as a “river of grass” that stretches some 580,000 square miles … cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … sent through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  Emiley Eloe-Fadrosh , …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help … was used to take the complex, high-dimensional data (the 136 tetranucleotide frequencies for each of the 12,063 …
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Stepwise recombination suppression around the mating-type locus in an ascomycete fungus with self-fertile spores
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Methanomethylovorans are the dominant dimethylsulfide-degrading methanogens in gravel and sandy river sediment microcosms
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Mining metatranscriptomes reveals a vast world of viroid-like circular RNAs
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JGI@25: Fueling Investigation into Methane-Making Microbes
… has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … Leahy and the JGI’s Rekha Seshadri in this JGIota, a Genome Insider podcast minisode. To date it is the single largest … with genomic DNA samples from Ruminococcus flavefaciens (XPD3002). With that sample, the Salk Institute team was able to …
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A More Intuitive Phytozome Interface
… version 12 of Phytozome will be retired, and  version 13 will become the current, and only, version of Phytozome … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … BioMart data warehouse interfaces they have come to rely on from Phytozome, with a more intuitive interface, deployed on …
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