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David Goodstein
… across the plant kingdom. Nucleic acids research 51 (16), 8383-8401. JT Lovell et al., 2022. GENESPACE tracks …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… with each intern’s interests or educational goals.  This year’s internship program was remote in its entirety due to … of our work,” said Nigel Mouncey, JGI Director. “This year is unlike any other year, but we’ve had another successful year. I was so …
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Products
Program Product Description Deliverables Cycle Time FY25 Q1  (median/75th percentile*) DNA Synthesis Constructs … metabolites and unidentified features in spectra. 167/214 Metabolomics Non-polar metabolite analysis Relative … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental …
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Emiley Eloe-Fadrosh
… from host-associated and environmental samples to identify and characterize genomic information from uncultivated … Nature Biotechnol. 35, 725-731. Paez-Espino D, et al. 2016. Uncovering Earth’s virome. Nature 536 , 425-430. … 2003 Board Member, Genomic Standards Consortium (2018-current) Steering Committee Member, International …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… distinguish males and females even when plants with multi-year generation times are young and haven’t physically … and Development Program of China (2017YFC0505203, 2016YFD0600101), and the National Key Project for Basic …
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“A STEM career is in reach and accessible”
Notes from the Summer 2018 Biotech Partners Interns from Antioch High School. …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Internship Program, first sampled the area in summer 2016.  She described the microbial diversity patterns of … information,” Ul-Hasan noted. “I spent a good portion of 2016 and all of 2017 looking for  C. californicus across the … “Being a JGI-UC Merced Intern during the summer of my first year as a Ph.D. student significantly, and positively, …
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John Vogel
… served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the development of … its diploid progenitors. Nature Communications 11 (1), 1-16  https://doi.org/10.1038/s41467-020-17302-5 Varoquaux, … Grass Brachypodium distachyon.  Nature. 463: 763-768 … 2018-present Member, EcoFAB steering committee 2014-present …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after a wildfire. The Science After a wildfire burns, … using both DNA and messenger RNA (mRNA) sequencing to identify those traits that have helped fungi, bacteria and viruses … that burned at the Colorado-Wyoming border, about a year after the fire. They sampled soil across a variety of …
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Forming Scientific Connections and Building Community
… interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome … Malmstrom, Nandita Nath & W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan … – were selected to continue their research over the school year.   …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
Switchgrass is a native, shrubby grass that can grow year-over-year on marginal soil and with few resources. … Plants . Since 2007, the JGI has been working on identifying switchgrass genes related to biomass production, … make it a viable candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and assembled the genomes of two …
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Introducing New Members of the JGI User Executive Committee
… been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve three-year terms and can serve no more than two consecutive terms. …
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