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Mindfully Moving JGI
… sequencing labs in Building 100 were silent. Twenty years after the JGI united the genomics expertise of three … miles away in another city and county began more than three years ago. For JGIers, the moving process began in 2017 with annual one-day cleanups. During those days, they …
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Introducing New Members of the JGI User Executive Committee
… been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve three-year terms and can serve no more than two consecutive terms. …
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John Vogel
… served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the development of … Brachypodium. Genetics, 223 (2), art. no. iyac146 DOI: 10.1093/genetics/iyac146 Gordon, et. al. 2020 Gradual …  https://doi.org/10.1111/nph.15662 Gordon, et. al. 2017 Extensive gene content variation in the Brachypodium …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… with each intern’s interests or educational goals.  This year’s internship program was remote in its entirety due to … of our work,” said Nigel Mouncey, JGI Director. “This year is unlike any other year, but we’ve had another successful year. I was so …
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JGI Scientists Pen Genome Watch Articles
… writing for the Nature Reviews Microbiology column last year — and there’s more to come in 2020. Researchers at the … column appears in six issues of the monthly magazine each year.  Until then, the column had been written solely by … by its genomes and metagenome , rather than just by 16S ribosomal RNA gene censuses.  Emiley Eloe-Fadrosh ,  …
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JGI@25: From Life at the Extremes to Editing Genomes
… other enzymes in the CRISPR-Cas system. For the past few years they have partnered with JGI’s Microbiome Data Science … longtime JGI collaborator Jill Banfield. "It was 2006, and I was sitting in my office on the seventh floor of … Cas9 with increased lifetime in human plasma. Nat Commun. 2017 Nov 10;8(1):1424. doi: 10.1038/s41467-017-01408-4. …
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Products
… Program Product Description Deliverables Cycle Time FY25 Q1  (median/75th percentile*) DNA Synthesis Constructs … shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing … and scientific merit Assembly, annotation ( Mycocosm ) 256/404 Fungal Resequencing SNP and short indel calls, …
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a wildfire. The Science After a wildfire burns, … using both DNA and messenger RNA (mRNA) sequencing to identify those traits that have helped fungi, bacteria and viruses … that burned at the Colorado-Wyoming border, about a year after the fire. They sampled soil across a variety of …
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Nikos Kyrpides
… dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. (2023) Identification of mobile … Nayfach S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol … Doctorate from the Aristotle University of Thessaloniki (2017) The van Niel International Prize for Studies in …
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities …
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Crysten Blaby-Haas
… and led the Quantitative Plant Science Initiative (2017-2022), a BER Science Focus Area (SFA).  … 2012 – 2015 Bright Futures Academic Scholarship, 2002 – 2006 HCA Foundation Scholarship, 2002 & 2004 Graduate Student … gene expression in green algae. PNAS  118 (7) e2017714118 Foflonker F and Blaby-Haas CE. (2021) Co-locality …
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Three Join the JGI User Executive Committee
… been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve three-year terms and can serve no more than two consecutive terms. …
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