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… of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior to joining …

… is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … and metabolism through reconstruction of microbial genomes from the environment . Nature. 2004. 428, 37–43 …

… move toward characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal …

… can demonstrate how competencies can be built. We recommend exploring how KBase (www.kbase.us) can support biological … The only requirements are that you stay under the 500-gigabase cap and that you don’t request outside of the … small proposal that might not max out the whole 500 gigabases? Is it better to try to reach that maximum with …

… diversity is wilder than ever. Imagine researchers exploring a dark room with a flashlight, only able to … through the publicly available  Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully … has been no real analysis of protein families from metagenomes per se.”  Recently, other research teams have …

In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, … Soghomonian share what it was like to take on one of these genomes.  …

… —have expanded the network of common gardens and are exploring improvements to switchgrass through more targeted … test genetic hypotheses in species with large and complex genomes,” said Lovell. “However, new sequencing technologies … traits similar to those from the Midwest, even though their genomes were very different. The high quality reference …

… to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project … Lab … Bowers et al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. …

Encyclopedia of Actinobacteria with 824 Isolate Reference Genomes. Cell Genomics 2: 100213Nayfach S et al. 2021. A …