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BAYESIAN SPATIAL-TEMPORAL MODELING OF ECOLOGICAL ZERO-INFLATED COUNT DATA.
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and … virus snowflakes in the snowstorm of genomic data involved developing special computational sieves to filter out … from JGI’s Nikos Kyrpides that his Microbiome Data Science group was also working on RNA virus mining. After a couple …
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint Genome Institute, where he leads three groups focused on HTP DNA design and assembly, strain … of eukaryotic algae, archaea and bacteria with a view to developing a deeper understanding of sequence-based gene …
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GAL08, an Uncultivated Group of Acidobacteria, Is a Dominant Bacterial Clade in a Neutral Hot Spring
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JGI Portals
Our data platforms are a key resource for the broader scientific … demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality … fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …
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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community … (INRAE) focused on in-depth exploration of ecology-related groups of fungi. The 1KFG project has brought together over …
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Brachypodium distachyon and Setaria viridis: Model Genetic Systems for the Grasses.
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The diatom Fragilariopsis cylindrus: A model alga to understand cold‐adapted life
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome … in collaborative, interdisciplinary research focused around developing foundational knowledge of viral diversity and … Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université Blaise Pascal, France …
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Shed Light in the DaRk LineagES of the Fungal Tree of Life—STRES
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The genome of Xylona heveae provides a window into fungal endophytism.
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MycoCosm portal: gearing up for 1000 fungal genomes
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