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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … proteins. PhycoCosm’s built-in connection to the DOE Systems Biology Knowledgebase (KBase) also allows … in algae. PhycoCosm joins other online data portals and tools created by JGI researchers, including the Integrated …
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Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis
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Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
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SoyCSN: Soybean context‐specific network analysis and prediction based on tissue‐specific transcriptome data
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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Statistical analysis of feature-based molecular networking results from non-targeted metabolomics data
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… researchers searching for sequences of RNA viruses in large data sets, their work may be akin to finding a single … Advances in sequencing technologies and computational tools have uncovered a diversity of viruses that infect not … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Twenty-five years of Genomes OnLine Database (GOLD): data updates and new features in v.9.
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Natural Prodcast Episode 23: Aaron Puri
… the genes for and explore the chemistry of quorum sensing systems, specifically the acyl homoserine lactones.  If you … restricted niche. And they do need broad host-range genetic tools so it’s more complicated than working with something … thing I’ve learned is that when JGI gives you a ton of data you better have someone really smart to be able to …
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Model Choice, Missing Data, and Taxon Sampling Impact Phylogenomic Inference of Deep Basidiomycota Relationships.
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