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Forming Scientific Connections and Building Community
… This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Mentors: Yi Zhai & John Vogel Project: Characterization of Brachypodium distachyon root transporters in plant-microbiome …
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Improving the Cacao Genome and Phytozome
… brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global cocoa bean production … will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao … released by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … proper introduction and a chance to talk about all the cool work she’s doing over at the University of Utah. So, you’ll … Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up …
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Tracking the ancestry of known and ‘ghost’ homeologous subgenomes in model grass Brachypodium polyploids
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A complete toolset for the study of Ustilago bromivora and Brachypodium sp. as a fungal-temperate grass pathosystem
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Repeated migration, interbreeding and bottlenecking shaped the phylogeography of the selfing grass Brachypodium stacei
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural Prodcast! … natural products – I did my Ph.D. with Craig Townsend and worked on aflatoxin biosynthesis, aflatoxin being a …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a limited and … the proposal PI and receive permission for their planned work.   …
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Exploring Polymorphisms Created by Transposable Elements
… My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species Brachypodium hybridum . …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to Episode 6 … of Wisconsin, where, among lots of other things, he works on the Tiny Earth project, which you’ll hear him …
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Webinar: PhycoCosm Tutorial
… about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. … or need to be changed, please contact us and we’ll work work it out 2.  Q(uestion): Do you publish the data … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Natural Prodcast Episode 17: Cassandra Quave
… herbarium curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of … This episode is Natural Prodcast’s conversation with Dr. Cassandra Quave, from Emory …
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