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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have … strengths into other plants. A brief timeline of sorghum projects at the JGI: 2009: JGI and collaborators use … the soybean relative Glycine max ( 2014 ) and the grass Brachypodium distachyon ( 2017 ), have identified many more …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in … and multidisciplinary nature of DOE mission science projects, this initiative aims to encourage innovative … and selection processes, making it difficult to propose projects that truly integrated the capabilities of more than …
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Qualitative and quantitative resistances to leaf rust finely mapped within two nucleotide‐binding site leucine‐rich repeat (NBS‐LRR)‐rich genomic regions of chromosome 19 in poplar
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new … as they turn carbon dioxide and water into oxygen and sugars. How photosynthesis works, though, is much harder to pin … — but the experts we were able to work with on this project to ask questions about structure and function,” …
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New Research Sheds Light on Diversity in the Deep Sea
… array of microorganisms adapted to living in extreme conditions. At these vents, and underwater volcanoes,  researchers … in the types of microorganisms that inhabit these sites, as well as the way in which those microorganisms …
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User Support Analysis Group
The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, … Our group also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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An Integrated Dataset to Understand Ecosystem Interaction
… tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. … environment. The Impact Dubbed “the” bioenergy tree, poplars are known for their genetic diversity. They hold … (LANL), and DE-AC05-76RL01830 (PNNL). … BioScales project on JGI Genomes Online Database … BioScales project …
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Synthetic Biology Informatics Group
… of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate methods SynTrack and associated tools, … Biology pipeline as well as provide process automation support Research Team    … For further details, please …
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How Filamentous Fungi Sense Food
… of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … complex carbohydrates, and then convert them into simple sugars. More importantly, when faced with a veritable buffet of … proposal akin to the Encyclopedia of DNA Elements (ENCODE) project, which is aimed at determining the activity, …
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Scaling Up Existing Skill Sets
… opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer … anyone in the Institute to get feedback and insights on the project and everyone’s willingness to guide or mentor me … and helped me consider working for a Department of Energy site after graduate school. Furthermore, my mentor Ben Cole …
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Natural Prodcast Episode 15: Katherine Duncan
… … Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk … natural products.” And that person was Professor Marcel Jaspars who was in the Chemistry Department. And I was enrolled … of North America. So then I came back and I worked on an EU project, the Scottish Association for Marine Science. And …
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