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Homoeolog expression divergence contributes to time of day changes in transcriptomic and glucosinolate responses to prolonged water limitation in Brassica napus
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JGI Early Career Researchers Featured in mSystems Special Issue
… sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … giant virus sequences in soil for the first time. A second approach known as DNA stable isotope probing (DNA … Research and Development (LDRD) Program at Lawrence Berkeley National Laboratory (Berkeley Lab). JGI is a DOE …
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JGI@25: Building a Better Bean
… in soil health through nitrogen-fixation and holds clues for maximizing soybean, the common bean’s close relative, as … value, providing anywhere from 10-30% of daily protein requirements. It is also an essential source of iron and … of different players and researchers across many different labs to be able to sequence a genome.” Since the paper was …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications The planet’s … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), to fill in …
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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding Associate Director for Computational Genomics, and led the computational … Dr. Rokhsar joined the faculty of University of California, Berkeley in 1989, as a member of the Physics Department and …
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help … health and diversity, which can in turn boost yields for both food and for candidate bioenergy feedstock crops. … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Their findings …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… the Community Science Program’s  Functional Genomics call for proposals .  On July 8, JGI’s DNA Synthesis Science … work that we are doing now.” Zerbe’s proposal involving six labs at universities around the world was the first of the … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Hypoxic survival requires a 2-on-2 hemoglobin in a process involving nitric oxide
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DNA Synthesis Program
Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … by synthesizing genes, pathways, and whole chromosomes for bioenergy and bioproduct applications. The program has …
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