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His responsibilities include the development of novel computational tools to identify virus sequences, the design …

… carried out postdoctoral work at LBNL, where he worked on computational and experimental approaches to study genome … and plasticity in bacterial gene regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered …

… sends Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your …

Needle Microbiome Carlos Vazquez and mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity … connections. Theo Loureaux : I wanted to first discover new methods with tools I wasn’t familiar with in terms of …

… developing new high-resolution and high-throughput methods to link uncultivated viruses to their host. With these new methods, she hopes to expand our understanding of the roles …

… genomes. “These genomes are so special, regular search methods don’t work,” said Roux. “The machine learning … microbial genomes and 2,249 of the 6,412 (35 percent) metagenomes mined for this study. “We’re simply getting much … The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific …

…       Despite advances in sequencing technologies and computational methods in the past decade, researchers have uncovered … to inform future analyses,” said José P. Faria, a KBase computational biologist at Argonne National Laboratory. “The …