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MycoCosm Tutorial
Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics … interactive web-based tools for comparative genomics and community annotation. Presented by Igor Grigoriev, Steven …
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How Microbes Can Protect Plants in Drier Straits
A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to help …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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David Goodstein
With a background in experimental and computational surface physics, Dr. Goodstein held … the JGI's direct collaborators and the wider plant science community. Dr. Goodstein’s group also develops and maintains …
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint Genome … with a view to developing a deeper understanding of sequence-based gene function. … B.Sc. (HONS) – University of … tool for targeted and genome-scale gRNA design and sequence extraction for prokaryotes and eukaryotes. …
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The Soil Blooms Green
Every fall, a mysterious green growth appears on top of farmers’ fields: a microbial community that might be quietly improving the soil. Penn …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
To set up flexible, repeatable experiments on plants and microbes, Trent Northen’s … well in the classroom. This episode, we visit Los Medanos Community College to see EcoFABs in action in Jill …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The Science … conventional food crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be … diseases are well known to be partially due to the DNA sequence that makes up an individual’s genome. The genes of …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent … metagenomics to sample the entirety of a microbial community out in its natural environment, scientists have …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil … candidates for genetic engineering. Our hope is that the community at large will follow that up,” Serrano said.  This …
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JGI Announces 2025 New Investigator Portfolio
Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu … proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and share our …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff … year in Berkeley, Calif. Convening the “viral ecogenomics” community, the VEGA symposium provides networking …
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