Results

Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
… and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Webinar: Introducing the BioSANS capability
… (BioSANS) instrument when applying to the FY2022 EMSL-JGI FICUS call for proposals. Presentations from: Scott Lea, … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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Complete Genome Sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T
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Ancient Algae Reveal Secrets of Plant Evolution
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … life.  These led to highly detailed assemblies for three strains of  Zygnema circumcarinatum . Published  May 2024 … The algal genomes sequences are available on the JGI’s  PhycoCosm portal. … This work was funded by the US …
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How Maize Makes An Antibiotic Cocktail
… as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. … infection. They analyzed differences among mutant maize strains, deploying gene editing to knock out four critical … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  …
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High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India
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Complete genome sequence of Geobacillus thermoglucosidasius C56-YS93, a novel biomass degrader isolated from obsidian hot spring in Yellowstone National Park
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Fungal Friends or Foes in Plant Roots
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Communications paper . The work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s … and enabling future metagenomics studies.   … The sequencing project was funded by the U.S. Department of …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … 150 archaeal viruses had been previously identified. The JGI researchers surveyed publicly available data in the … i.e., by Harald Huber and Sebastien Ferreira-Cerca, and sequencing of MSI metagenomes within the Census of Deep Life …
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Daniel Udwary
Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests … gene clusters in bacteria and fungi. Prior to joining the JGI, he spent time as a faculty member at the University of … HPC consultant with NERSC. Dr. Udwary co-hosts JGI’s "Natural Prodcast" podcast, a "fireside chat"-style …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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