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Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … to look at how this enzyme family evolved across 90 species. “One unique thing about this work was our focus on … enzymes in specialized metabolism, organisms tend to evolve multiple copies of enzymes, similar to including half a …
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help … a mycobiome culture collection consisting of fungal species from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the … The sequencing project was funded by the U.S. Department of Energy …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate … understanding of this symbiosis could offer improvements in multiple directions. On the fungi side, underground … this work leverages.   These experiments focused on two species at once: the model legume species  Medicago …
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Overview of the Genomes OnLine Database (GOLD)
… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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Metatranscriptomic Sequencing of a Cyanobacterial Soil-Surface Consortium with and without a Diverse Underlying Soil Microbiome
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Fine-scale variation in meiotic recombination in Mimulus inferred from population shotgun sequencing
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Diversity and population structure of northern switchgrass as revealed through exome capture sequencing
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Discovery of photosynthesis genes through whole-genome sequencing of acetate-requiring mutants of Chlamydomonas reinhardtii
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The Sphagnome Project: enabling ecological and evolutionary insights through a genus‐level sequencing project
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Massively parallel sequencing identifies the gene Megf8 with ENU-induced mutation causing heterotaxy
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