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JGI@25: Solving the Mystery of the Missing Oil
… cell genomics expertise led to the identification of a new “oil-seeking” species related to Oceanospirillales , …
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Cataloging the Microbes that Manage the Health of River Systems
… program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established … work across platforms. … This work was partially supported by awards from US Department of Energy (DOE) Office of … DE-SC0021350, and DE-AC02-05CH11231. Partial support by US National Science Foundation awards DEB1840243, …
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JGI Hosts GPU Hackathon in May
… computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility (OLCF), … assistance from mentors and a team to port their code to a new architecture. Proposals are due March 1, 2019 for the …
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Methane Makers in Yosemite’s Lakes
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Extracting the Secrets of Secondary Metabolites
… in 2019. Now, that power is poised to grow exponentially by combining it with CRISPR.  By employing CRAGE, researchers are no longer limited to … luminescens and its secondary metabolites work could yield new tools for pest control. Secondary metabolites are highly …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… habitat range. But at what cost?  A collaborative team led by researchers at the University of Texas (UT) at Austin, … , which can have pronounced ecological and evolutionary consequences. A previous study conducted by our research team … production. Building on the framework provided by our new switchgrass manuscript , we plan to use existing data as …
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Waiting to Respire
… ability to produce their own food and generate oxygen as a byproduct. The abundance of oxygen shaped the evolution of … was then used to predict the metabolic strategies applied by a common ancestor to all five lineages. In the lab of UC … Click here to read the “Behind the Paper” blog post by Paula Matheus Carnevali. … The U.S. Department of Energy …
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Fungus Fuels Tree Growth
… particular interest to the U.S. Department of Energy (DOE). By better understanding how poplar responds to its intimate … of endophyte  M. elongata and poplar, a team led by Hui-Ling (Sunny) Liao of the University of Florida … in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, …
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Fungal Friends or Foes in Plant Roots
… office building, its roots are akin to the ground floor lobby. People walking into the lobby have many reasons for being there, but they’re not always … from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …
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DOE JGI Interns Share Their Summer Experiences
… at UC Merced . CAMP is a statewide initiative funded by the National Science Foundation (NSF) and supports …
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Building Sphagnum Genomic Resources
… potential carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers … up nearly 3 percent of the earth’s land surface. In the New Phytologist, researchers led by David Weston of Oak Ridge National Laboratory make the …
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When “The Blob” Made It Hotter Under the Water
… model of how marine microbial communities are affected by warming events. More time-series studies could help … models on how climate change may impact marine microbes and by extension, the ocean’s capacity to act as a carbon sink. … samples. Genomic DNA extracted from the water samples were sequenced by the U.S. Department of Energy (DOE) Joint …
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