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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San … and chat with representatives from KBase and the JGI about collaborative science opportunities. Learn how to apply for a project with the JGI Community Science Program, and how you can use the KBase …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint … Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus and plasmid workflows for the National Microbiome Data Collaborative.  This award recognizes distinguished research …
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Expanding Virophage Diversity
… are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. … are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Almost all known virophage genomes share only four genes in common: major and minor capsid proteins (MCP and mCP, …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… order for all residents took effect in six San Francisco Bay Area counties. The JGI, located at Lawrence Berkeley National Laboratory, is located in one of those counties. The shelter-in-place order has since been extended … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… this short audio production, we’ll hear from Ed Hall, an ecologist at Colorado State University in Fort Collins. He’s part of a JGI-supported project studying the … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… Research (SCGSR) program . Her research project, “Microbial Community Structure and Methane Production in California’s … focuses on anthropogenic impacts on wetland microbiome composition and metabolism, work on which she is expanding … water transport canals. Inspired by Randall Munroe’s xkcd comic “Up Goer Five” and his subsequent book  Thing …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… Webinar inviting researchers to submit white papers to the Community Science Program’s  Functional Genomics call for … Webinar inviting researchers to submit white papers to the Community Science Program’s  Functional Genomics call for … of the Functional Genomics call’s approved proposals by a consortium. The consortium looked at how different bioenergy …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… outsize role in cycling carbon and nutrients. These microscopic algae have managed to adapt to a unique set of conditions in polar waters, including vast shifts in sunlight and frigid temperatures. These waters also contain higher concentrations of the essential trace metal …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
… Richardson , CEO and Founder, MicroByre (Cyclotron Road company) Hosted by Nigel Mouncey, Director, DOE Joint Genome … Read a synthesis from the panel discussion  here . Contact  Robin Johnston for followup questions.     … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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The Expanding Universe of Methane Metabolisms in Archaea
… archaea likely played a key role in determining the composition of the Earth’s atmosphere and regulating the … available metagenome data provided by the other study co-authors, and reconstructed from these 10 … anaerobic methanotrophic and short-chain alkane-oxidizing archaea. They used IMG because the database …
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Green Algae Reveal One mRNA Encodes Many Proteins
… – that is, a single gene makes messenger RNA, which encodes a single protein. Gene expression in eukaryotes was … – that is, a single gene makes messenger RNA, which encodes a single protein. Recently reported in the Proceedings … polycistronic expression – in which two or more genes are encoded on a single molecule of mRNA – in two species of green …
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Boosting Small Molecule Production in Super “Soup”
… running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by Hal Alper at The … out of the cell structure into a cell-free system. The work complements efforts to further develop sustainable … Berkeley National Laboratory, indicates metabolic pathways could be more productive outside the cell environment, which …
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