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JGI Hosts GPU Hackathon in May
Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life sciences that can be ported to the GPU architecture. A GPU hackathon is a five-day …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a … that showcase our collaborations and capabilities to enable great science that will help solve energy and … a Genome Insider podcast minisode.) Since the JGI’s early sequencing of C. reinhardtii became available, data mined by …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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JGI announces final round of 2022 Functional Genomics awardees
Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic information into biological function. Through our CSP Functional Genomics … leverage the JGI’s DNA synthesis and omics capabilities to enhance understanding of gene and genome function.  Below …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … where you can browse the genetic blueprints of these photosynthetic organisms. PhycoCosm is one of the largest data …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … where you can browse the genetic blueprints of these photosynthetic organisms. PhycoCosm is one of the largest data …
Learn more
Exploring Possibilities: 2022 JGI-UC Merced Interns
… more about what they learned from working with their JGI mentors, what challenges they overcame, and what new skill sets they look forward to taking back to school.  The interns from this cohort and … And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “This represents the largest … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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The JGI Data Portal: Improving User Experience
… download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is currently only … from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … Microbial Genomes and Metagenomes Program since 2011. Prior to joining the DOE Joint Genome Institute, Dr. Kyrpides led …
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2023 Progress Report
… for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide … capabilities, large-scale data, and professional expertise to support the global research community in studies of … and environmental systems. We optimize our service to the community through responsibly managing our people and …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
Trubl, a virologist at Lawrence Livermore National Laboratory, wants to understand how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what …
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