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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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VEGA Symposium
… Lab Attendee – $250 Student – $200 Regular Rates (begin September 19, 2026) General & Berkeley Lab Attendee – $300 Students & Postdocs – $250   Hosted by the DOE Joint Genome Institute, the 5th Viral EcoGenomics and Applications (VEGA) … VEGA 26 will take place at the UC Berkeley MLK Building, in the East Pauley Ballroom, November 18–19, 2026. The …
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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of … scientific research from a broad range of disciplines. Three calls fall under the umbrella of our CSP: The … a range of JGI capabilities, and also requires a Letter of Intent. The New Investigator call is for PIs who have never …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in the future, …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts are the factories in plant cells. Using photosynthesis, they take raw materials including … 637675 ‘SYBORG’), as well as the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this … mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative … The Science Most organisms use oxygen to convert food into energy. However, in environments with little or no … by the United States Department of Agriculture National Institute of Food and Agriculture grant 2018-67015-27495, …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a … in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, … This work was supported by the Plant-Microbe Interfaces program at the Oak Ridge National Laboratory …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from … mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the family tree for Lentinula. … the GENOBIOREF (BIO2017-86559-R) project of the Spanish Ministry of Science and Innovation (cofinanced by FEDER …
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DAP-seq Drives Robust Mapping of Gene Regulation
… view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex wiring behind a city’s power grid. Just as … of where those binding sites are in the genome — those sequences are moving around, disappearing and appearing in …
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