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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… understanding which microbes are present in a sample, to generate data about which organisms are active, and which … These analyses provide granular insight into microbial functions, traits and competition, illuminating the inner … process to carry out the onerous SIP sample processing. Generating these datasets opens up the possibility of new …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… and analysis. This way, JGI users — both primary, data-generating users, as well as secondary, data-downloading … can access and use to manage the information being generated across disciplines  These advanced computing … are at the core of many environmental processes, and their genetic makeup forms the basis of their behavior in the …
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Promoting the Power of Viral Metagenomics
… genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Building Wet and Dry Lab Skills
… worked with mentors Yi Zhai and John Vogel from the Plant Functional Genomics Group to study the effects of  … project is to determine how mutations in plant transporter genes affect microbiome composition and plant growth. Under …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… solutions for bioproducts to support the bioeconomy. Functional diversity theme. Reading the genomes of …
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Fishing for Novel Cellulose Degraders
… screen, they can now identify microbes with specific functional characteristics. When they tested the screen … those that are in low abundances—and their functional roles in their community. This study shows how the function-driven, single-cell screen can uncover more about …
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Alabama A&M Interns Access An Abundance of Knowledge
… to gain hands-on experience in molecular biology and plant functional genomics, because this work is essential for …
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JGI@25: Fueling Investigation into Methane-Making Microbes
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Better Crops With a Pointillist Approach to Plant Genomics
… using measurements from single cells to understand which genes help plants grow, get nutrients, weather drought, and …
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An Automated Tool for Assessing Virus Data Quality
… limits the ability of researchers to accurately perform functional assessment, host prediction, and phylogenetic analysis. The development of CheckV helps … these sequences may be tainted by the presence of non-viral genes. Up to this point, there has been a lack of fast and …
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